7XCC
Crystal Structure of the Disease-Specific Protein of Rice Stripe Virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9789 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 59.408, 74.193, 78.684 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.374 - 1.750 |
R-factor | 0.1697 |
Rwork | 0.165 |
R-free | 0.20800 |
Structure solution method | SAD |
RMSD bond length | 0.019 |
RMSD bond angle | 1.370 |
Data reduction software | XDS |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.740 |
High resolution limit [Å] | 1.710 | 4.640 | 1.710 |
Rmerge | 0.119 | 0.091 | 0.537 |
Rmeas | 0.128 | 0.098 | 0.607 |
Rpim | 0.046 | 0.037 | 0.271 |
Total number of observations | 146645 | ||
Number of reflections | 18988 | 1030 | 798 |
<I/σ(I)> | 13.5 | ||
Completeness [%] | 99.2 | 98.3 | 86 |
Redundancy | 7.7 | 7.1 | 4.4 |
CC(1/2) | 0.992 | 0.780 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 289 | PEG 3350, Ammonium acetate, HEPES Sodium |