7XC3
Crystal structure of SARS-CoV-2 NSP3 Macrodomain 3 (SARS-unique domain-M)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 59.924, 59.924, 184.342 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.990 - 1.700 |
R-factor | 0.1975 |
Rwork | 0.196 |
R-free | 0.21790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2w2g |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.990 | 1.761 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.154 | 0.848 |
Number of reflections | 36862 | 3661 |
<I/σ(I)> | 29 | 12 |
Completeness [%] | 99.3 | 96.9 |
Redundancy | 3.2 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.8 | 293 | 3.5 M sodium formate, pH 6.8 |