7X4Y
Crystal structure of Bacteroides thetaiotaomicron glutamate decarboxylase BTGAD-PLP-GABA complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-05-02 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 109.736, 130.689, 109.761 |
| Unit cell angles | 90.00, 100.04, 90.00 |
Refinement procedure
| Resolution | 26.490 - 1.900 |
| R-factor | 0.1825 |
| Rwork | 0.181 |
| R-free | 0.21230 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1pmm |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.940 |
| High resolution limit [Å] | 1.900 | 5.180 | 1.910 |
| Rmerge | 0.079 | 0.049 | 0.463 |
| Rmeas | 0.093 | 0.057 | 0.545 |
| Rpim | 0.047 | 0.028 | 0.283 |
| Number of reflections | 236110 | 11848 | 11767 |
| <I/σ(I)> | 4.5 | ||
| Completeness [%] | 99.0 | 97.5 | 99 |
| Redundancy | 3.9 | 4 | 3.6 |
| CC(1/2) | 0.996 | 0.850 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4 | 293 | 13% PEG 3350, 7% pH4.0 TacsimateTM |






