7X2Y
Crystal Structure of cis-4,5-dihydrodiol phthalate dehydrogenase in complex with NAD+ and 3-Hydroxybenzoate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-13 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.579, 88.315, 162.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.180 - 2.480 |
R-factor | 0.1943 |
Rwork | 0.192 |
R-free | 0.23510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3moi |
RMSD bond length | 0.008 |
RMSD bond angle | 1.643 |
Data reduction software | CrysalisPro |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.180 | 2.540 |
High resolution limit [Å] | 2.480 | 2.480 |
Number of reflections | 28203 | 3138 |
<I/σ(I)> | 11.6 | |
Completeness [%] | 99.8 | 99.8 |
Redundancy | 6.8 | |
CC(1/2) | 0.994 | 0.904 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Ammonium phosphate dibasic, and 20 % polyethylene glycol 3350, 100 mM Tris buffer pH 8.0 |