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7WZO

Crystal structure of the SARS-CoV-2 nucleocapsid protein N-terminal domain in complex with Ubl1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-05-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97581
Spacegroup nameP 31 2 1
Unit cell lengths69.537, 69.537, 269.253
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.020 - 2.640
R-factor0.2161
Rwork0.214
R-free0.24680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vnu
RMSD bond length0.009
RMSD bond angle1.084
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0202.770
High resolution limit [Å]2.6402.640
Rmerge0.1501.187
Rpim0.0490.429
Number of reflections231643003
<I/σ(I)>13.22.4
Completeness [%]99.7
Redundancy18.7
CC(1/2)0.9970.680
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52910.1 M sodium citrate, pH 5.0, 20% w/v PEG 8000

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