7WXN
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH7.5 in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2019-04-28 |
Detector | BRUKER PHOTON 100 |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.028, 84.620, 91.301 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 62.060 - 2.400 |
R-factor | 0.2471 |
Rwork | 0.245 |
R-free | 0.28540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7wxj |
RMSD bond length | 0.004 |
RMSD bond angle | 0.848 |
Data reduction software | PROTEUM PLUS |
Data scaling software | PROTEUM PLUS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.060 | 2.240 |
High resolution limit [Å] | 2.140 | 2.140 |
Rmerge | 0.185 | 0.488 |
Number of reflections | 15538 | 1605 |
<I/σ(I)> | 10.54 | 2.51 |
Completeness [%] | 96.6 | 80.3 |
Redundancy | 10.37 | 2.19 |
CC(1/2) | 0.961 | 0.650 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295.15 | 0.1 M HEPES pH 7.5, 25% w/v Polyethylene glycol 3,350 |