7WLH
The crystal structure of African swine fever virus I215L
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 142.302, 142.302, 39.319 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.600 - 2.650 |
R-factor | 0.1986 |
Rwork | 0.196 |
R-free | 0.24070 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.845 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.740 |
High resolution limit [Å] | 2.650 | 5.710 | 2.650 |
Rmerge | 0.099 | 0.058 | 0.436 |
Rmeas | 0.101 | 0.059 | 0.454 |
Rpim | 0.023 | 0.014 | 0.120 |
Total number of observations | 226540 | ||
Number of reflections | 12713 | 1407 | 870 |
<I/σ(I)> | 5.6 | ||
Completeness [%] | 94.5 | 99.9 | 66.1 |
Redundancy | 17.8 | 18.9 | 10.2 |
CC(1/2) | 0.999 | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Sodium Acetate: HCl (pH 4.6), and 2.8 M Sodium Formate |