7WIF
The THF-II riboswitch bound to H4B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 66.226, 66.226, 92.793 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.680 - 2.860 |
R-factor | 0.1938 |
Rwork | 0.192 |
R-free | 0.21380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7wi9 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.595 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.900 |
High resolution limit [Å] | 2.850 | 7.690 | 2.850 |
Rmerge | 0.091 | 0.075 | 0.559 |
Rmeas | 0.094 | ||
Total number of observations | 85703 | ||
Number of reflections | 5787 | 534 | 538 |
<I/σ(I)> | 11.8 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 8.1 | 7.9 | 10.1 |
CC(1/2) | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 100mM sodium citrate pH6.5, 1.5-2.5M Ammonium Sulfate |