7WEW
Structure of adenylation domain of epsilon-poly-L-lysine synthase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2019-01-22 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 152.511, 152.511, 48.202 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.280 - 2.300 |
R-factor | 0.1887 |
Rwork | 0.187 |
R-free | 0.21990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vnq |
RMSD bond length | 0.008 |
RMSD bond angle | 0.968 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.280 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.224 | 1.275 |
Rmeas | 0.239 | 1.366 |
Rpim | 0.083 | 0.481 |
Number of reflections | 28719 | 2791 |
<I/σ(I)> | 5.9 | |
Completeness [%] | 99.6 | 100 |
Redundancy | 8.2 | 8 |
CC(1/2) | 0.984 | 0.741 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 0.2 M potassium sodium tartrate 0.1 M trisodium citrate 1.8 M ammonium sulfate |