7W6U
Structure of SARS-CoV-2 spike receptor-binding domain complexed with its receptor equine ACE2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-30 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97918 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 195.570, 195.570, 149.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.210 - 2.560 |
R-factor | 0.195 |
Rwork | 0.193 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6lzg |
RMSD bond length | 0.004 |
RMSD bond angle | 0.732 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19rc3_4028) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.390 | 2.630 |
High resolution limit [Å] | 2.560 | 2.560 |
Rmerge | 0.172 | |
Rmeas | 0.175 | |
Rpim | 0.034 | 0.450 |
Number of reflections | 46770 | 3434 |
<I/σ(I)> | 17.8 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 26.8 | 26.6 |
CC(1/2) | 0.999 | 0.728 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 10% (w/v) PEG 1000, 10% (w/v) PEG 8000 |