7W6I
The crystal structure of MLL1 (N3861I/Q3867L/C3882SS)-RBBP5-ASH2L in complex with H3K4me1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 75.777, 44.422, 120.097 |
Unit cell angles | 90.00, 107.51, 90.00 |
Refinement procedure
Resolution | 38.180 - 2.560 |
R-factor | 0.2024 |
Rwork | 0.198 |
R-free | 0.24450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5f6l |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.640 |
High resolution limit [Å] | 2.550 | 5.490 | 2.550 |
Rmerge | 0.154 | 0.074 | 0.849 |
Rmeas | 0.175 | 0.083 | 0.990 |
Rpim | 0.081 | 0.038 | 0.494 |
Total number of observations | 55070 | ||
Number of reflections | 12247 | 1275 | 1153 |
<I/σ(I)> | 3.2 | ||
Completeness [%] | 99.4 | 99.5 | 98.1 |
Redundancy | 4.5 | 4.5 | 3.7 |
CC(1/2) | 0.992 | 0.586 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.2 M Sodium chloride, 0.1 M HEPES, pH 7.5, 25% w/v polyethylene glycol 3,350 |