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7VUQ

Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]93
Detector technologyPIXEL
Collection date2019-11-11
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979183
Spacegroup nameP 21 21 21
Unit cell lengths84.453, 84.627, 139.427
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.003 - 3.100
Rwork0.224
R-free0.24870
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1a3q
RMSD bond length0.011
RMSD bond angle1.866
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.4803.270
High resolution limit [Å]3.1003.100
Number of reflections187562690
<I/σ(I)>16.1
Completeness [%]99.8
Redundancy13.1
CC(1/2)0.9990.934
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1M Sodium malonate, pH 4.0, 50mM CsCl, 2.5% PEG 3350

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