7VU9
Pholiota squarrosa lectin (PhoSL) in complex with fucose(alpha1-6)[GlcNAc(beta1-4)]GlcNAc
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2019-10-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 126.739, 127.057, 39.418 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.865 - 2.154 |
Rwork | 0.179 |
R-free | 0.24460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6a86 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.774 |
Data reduction software | XDS (Mar 15, 2019) |
Data scaling software | XDS (Mar 15, 2019) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.870 | 2.280 |
High resolution limit [Å] | 2.154 | 2.154 |
Rmerge | 0.087 | 0.661 |
Number of reflections | 17730 | 5358 |
<I/σ(I)> | 9.18 | 1.81 |
Completeness [%] | 99.5 | 99.3 |
Redundancy | 3.5 | 3.43 |
CC(1/2) | 0.996 | 0.684 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 4.3 M sodium formate (pH 7.0) |