7VQM
GH2 beta-galacturonate AqGalA in complex with galacturonide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-25 |
Detector | DECTRIS PILATUS3 R 200K-A |
Wavelength(s) | 1.54056 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 83.413, 154.006, 115.925 |
Unit cell angles | 90.00, 109.78, 90.00 |
Refinement procedure
Resolution | 19.950 - 2.400 |
R-factor | 0.2025 |
Rwork | 0.200 |
R-free | 0.25730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6d1n |
RMSD bond length | 0.007 |
RMSD bond angle | 1.529 |
Data reduction software | CrysalisPro |
Data scaling software | Aimless (0.7.7) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.950 | 19.940 | 2.440 |
High resolution limit [Å] | 2.400 | 13.150 | 2.400 |
Rmerge | 0.138 | 0.062 | 0.455 |
Rmeas | 0.154 | 0.068 | 0.546 |
Rpim | 0.065 | 0.028 | 0.298 |
Total number of observations | 2343 | 17128 | |
Number of reflections | 107088 | 477 | 5257 |
<I/σ(I)> | 7.2 | 12.1 | 2 |
Completeness [%] | 99.7 | 70.4 | 99.8 |
Redundancy | 5.4 | 4.9 | 3.3 |
CC(1/2) | 0.972 | 0.994 | 0.804 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 100 mM MOPSO buffer (pH6.5), 12.5% PEG4000, and 20% 1,2,6-hexanetriol |