7VP8
Crystal structure of ferritin from Ureaplasma urealyticum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-01-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 178.441, 178.441, 178.441 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.341 - 2.002 |
R-factor | 0.1623 |
Rwork | 0.159 |
R-free | 0.19050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Alphafold2 |
Data reduction software | HKL-2000 |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.341 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.151 | 0.630 |
Number of reflections | 16992 | 832 |
<I/σ(I)> | 42.6 | 9.37 |
Completeness [%] | 100.0 | |
Redundancy | 37.9 | |
CC(1/2) | 0.995 | 0.976 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | NaCl, PEG 6000 |