7VME
Crystal structure of a hydrolase in apo form 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17B1 |
Synchrotron site | SSRF |
Beamline | BL17B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-07-04 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.700, 65.954, 82.885 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.600 - 1.780 |
R-factor | 0.1754 |
Rwork | 0.172 |
R-free | 0.21010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sbn |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.840 |
High resolution limit [Å] | 1.780 | 3.830 | 1.780 |
Rmerge | 0.097 | 0.035 | 0.856 |
Rmeas | 0.103 | 0.038 | 0.917 |
Rpim | 0.036 | 0.014 | 0.327 |
Total number of observations | 196620 | ||
Number of reflections | 24158 | 2582 | 2374 |
<I/σ(I)> | 7.9 | ||
Completeness [%] | 99.9 | 99.5 | 100 |
Redundancy | 8.1 | 7.7 | 7.7 |
CC(1/2) | 0.999 | 0.805 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 295 | 20% PEG 8000, 0.2M calcium acelate, 0.1M sodium cacodylate |