7VIV
Crystal structure of the I73R from African Swine Fever Virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-10-31 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | H 3 |
Unit cell lengths | 89.360, 89.360, 46.160 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.820 - 2.000 |
R-factor | 0.1872 |
Rwork | 0.185 |
R-free | 0.22280 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.680 | 44.680 | 2.010 |
High resolution limit [Å] | 1.960 | 8.770 | 1.960 |
Rmerge | 0.046 | 0.033 | 0.875 |
Rmeas | 0.048 | 0.035 | 0.925 |
Rpim | 0.015 | 0.011 | 0.298 |
Total number of observations | 99802 | 956 | 7121 |
Number of reflections | 9855 | 109 | 749 |
<I/σ(I)> | 23 | 47.4 | 2.5 |
Completeness [%] | 99.9 | 98.8 | 99.9 |
Redundancy | 10.1 | 8.8 | 9.5 |
CC(1/2) | 1.000 | 1.000 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 5.5 | 289 | 0.2 M Li2SO4, 0.1 M Bis-Tris pH 5.5, 25% (w/v) PEG3350 |