7VHV
Crystal structure of S. aureus D-alanine alanyl carrier protein ligase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-11-16 |
Detector | APEX II CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 89.468, 88.510, 130.850 |
Unit cell angles | 90.00, 91.67, 90.00 |
Refinement procedure
Resolution | 39.911 - 2.550 |
R-factor | 0.1909 |
Rwork | 0.189 |
R-free | 0.23980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fcc |
RMSD bond length | 0.012 |
RMSD bond angle | 1.489 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.640 |
High resolution limit [Å] | 2.550 | 2.550 |
Number of reflections | 66485 | 8768 |
<I/σ(I)> | 10.3 | |
Completeness [%] | 99.5 | |
Redundancy | 5 | |
CC(1/2) | 0.961 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 5% PEG 4K, 0.16 M Magnesium acetate, 0.1 M Na. cacodylate, pH 7.5 |