Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7VEW

Crystal structure of bacterial chemotaxis-dependent pectin-binding protein SPH1118 in complex with unsaturated trigalacturonic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-18
DetectorDECTRIS EIGER X 4M
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths57.687, 83.657, 148.521
Unit cell angles90.00, 101.04, 90.00
Refinement procedure
Resolution48.591 - 1.920
Rwork0.210
R-free0.23240
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vev
RMSD bond length0.014
RMSD bond angle1.730
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6002.020
High resolution limit [Å]1.9001.900
Rmerge0.0860.645
Number of reflections10840417122
<I/σ(I)>11.3
Completeness [%]99.5
Redundancy5.77
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.229322% PEG3000 0.15 M Potassium sodium tartrate 0.1 M HEPES 23.4 mM Unsaturated trigalacturonic acid

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon