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7VC5

Toxoplasma gondii Prolyl-tRNA Synthetase (TgPRS) in Complex with inhibitor T35 and Febrifugine (FF) at 1.61 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2019-12-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameC 1 2 1
Unit cell lengths115.194, 73.092, 74.936
Unit cell angles90.00, 111.57, 90.00
Refinement procedure
Resolution53.562 - 1.612
R-factor0.1665
Rwork0.165
R-free0.19560
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7f9s
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX (1.15rc1_3423)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.3801.640
High resolution limit [Å]1.6101.610
Rmeas0.0502.511
Number of reflections744553674
<I/σ(I)>15.4
Completeness [%]99.9100
Redundancy6.76.6
CC(1/2)1.0000.300
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1 M Amino acids (0.2M DL-Glutamic acid monohydrate, 0.2M DL-Alanine, 0.2M Glycine, 0.2M DL-Lysine monohydrochloride and 0.2M DL-Serine), 0.1 M Buffer (Imidazole; MES monohydrate), 30 % v/v Precipitant (40% v/v Ethylene glycol, 20% w/v PEG 8000)

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PDB entries from 2024-05-15

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