7V6S
Crystal structure of bacterial peptidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-03-27 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9793 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 59.835, 59.835, 133.777 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.340 - 1.883 |
R-factor | 0.2151 |
Rwork | 0.211 |
R-free | 0.24880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2k1g |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.340 | 40.340 | 1.990 |
High resolution limit [Å] | 1.880 | 5.600 | 1.880 |
Rmerge | 0.241 | 0.083 | 1.154 |
Rmeas | 0.254 | 0.088 | 1.216 |
Number of reflections | 36945 | 891 | 3138 |
<I/σ(I)> | 9.6 | 21.14 | 2.28 |
Completeness [%] | 99.3 | 96.6 | 96.8 |
Redundancy | 10.334 | 9.285 | 9.854 |
CC(1/2) | 0.990 | 0.993 | 0.762 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 9.1 | 290 | 0.2M sodium phosphate dibasic, 20% PEG 3350 |