7V63
Structure of dimeric uPAR at low pH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-02-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 77.449, 77.449, 275.526 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.037 - 2.906 |
R-factor | 0.2409 |
Rwork | 0.239 |
R-free | 0.27310 |
Structure solution method | SAD |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CRANK |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.000 |
High resolution limit [Å] | 2.900 | 6.240 | 2.900 |
Rmerge | 0.126 | 0.075 | 0.313 |
Total number of observations | 157976 | ||
Number of reflections | 17605 | 2156 | 906 |
<I/σ(I)> | 7.6 | ||
Completeness [%] | 90.3 | 99.1 | 48.2 |
Redundancy | 9 | 8.9 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 295 | 1.8-2.2 M ammonium sulphate in 50 mM sodium acetate at pH 4.5-5.2 |