7V2J
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor 33
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 193 |
Detector technology | PIXEL |
Collection date | 2021-07-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.215, 47.347, 77.977 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.470 - 2.240 |
R-factor | 0.1844 |
Rwork | 0.181 |
R-free | 0.24110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5z1s |
RMSD bond length | 0.015 |
RMSD bond angle | 1.733 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.5.32) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.470 | 2.310 |
High resolution limit [Å] | 2.240 | 2.240 |
Rmerge | 0.094 | 0.169 |
Rmeas | 0.099 | 0.177 |
Rpim | 0.028 | 0.051 |
Number of reflections | 6504 | 583 |
<I/σ(I)> | 18.8 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 12.4 | 11.8 |
CC(1/2) | 0.997 | 0.995 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.1 M TRIS HCl, pH 8.5, 8% PEG8000 |