7UXO
Structure of PDL1 in complex with FP30790, a Helicon Polypeptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 59.410, 62.980, 83.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.220 - 2.250 |
R-factor | 0.22 |
Rwork | 0.218 |
R-free | 0.24990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zqk |
RMSD bond length | 0.008 |
RMSD bond angle | 0.943 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.220 | 2.330 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.043 | |
Number of reflections | 7385 | 572 |
<I/σ(I)> | 22.2 | |
Completeness [%] | 95.7 | |
Redundancy | 6 | |
CC(1/2) | 0.999 | 0.978 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 0.1 M Sodium acetate pH 4.6, 2.0 M Sodium formate. |