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7UUM

Crystal structure of aminoglycoside resistance enzyme ApmA, complex with paromomycin and coenzyme A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 43 3 2
Unit cell lengths133.748, 133.748, 133.748
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.750 - 2.740
R-factor0.2243
Rwork0.223
R-free0.24940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7jm2
RMSD bond length0.003
RMSD bond angle0.725
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20_4459)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.790
High resolution limit [Å]2.7402.740
Rmerge0.1971.791
Rpim0.0360.548
Number of reflections11364548
<I/σ(I)>20.211.31
Completeness [%]100.0100
Redundancy30.113.2
CC(1/2)1.0000.527
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72980.2 M litihium sulfate, 0.1 M Tris pH 8.5, 23% PEG3350, 14 mM paromomycin

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