7US3
Structure of Putrescine N-hydroxylase Involved Complexed with NADP+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 124.827, 126.314, 140.248 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 88.790 - 2.200 |
R-factor | 0.1837 |
Rwork | 0.182 |
R-free | 0.22250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xbb |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 140.250 | 140.250 | 2.240 |
High resolution limit [Å] | 2.200 | 12.070 | 2.200 |
Rmerge | 0.249 | 0.079 | 1.383 |
Rmeas | 0.268 | 0.086 | 1.502 |
Rpim | 0.095 | 0.033 | 0.570 |
Total number of observations | 902459 | 5017 | 32196 |
Number of reflections | 111523 | 787 | 4908 |
<I/σ(I)> | 8.8 | 26.8 | 1.3 |
Completeness [%] | 99.3 | 98.1 | 89 |
Redundancy | 8.1 | 6.4 | 6.6 |
CC(1/2) | 0.987 | 0.987 | 0.466 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.05 M ammonium sulfate, 0.05 M Bis-Tris pH 6.5, and 30% pentaerythritol ethoxylate (15/4 EO/OH) |