7UPO
Crystal structure of designed heterotrimeric assembly DHT03
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033167 |
Spacegroup name | P 1 |
Unit cell lengths | 37.250, 39.920, 50.420 |
Unit cell angles | 88.97, 105.79, 115.32 |
Refinement procedure
Resolution | 48.210 - 2.100 |
R-factor | 0.231 |
Rwork | 0.226 |
R-free | 0.27260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | de novo designed DHT03 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.359 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.210 | 2.175 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.040 | 0.709 |
Rmeas | 0.057 | 1.003 |
Rpim | 0.040 | 0.709 |
Number of reflections | 11814 | 500 |
<I/σ(I)> | 8.68 | 0.95 |
Completeness [%] | 74.0 | |
Redundancy | 1.9 | |
CC(1/2) | 0.994 | 0.646 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277.15 | 0.1M HEPES pH7.5, 20%(w/v) PEG8000 |