Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7UF4

RibB from Vibrio cholera bound with intermediate 1 of the reaction cycle and D-ribulose-5-phosphate (D-Ru5P)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-08
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameC 2 2 21
Unit cell lengths60.337, 78.558, 90.535
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.280 - 2.200
R-factor0.1744
Rwork0.169
R-free0.22390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4p8e
RMSD bond length0.012
RMSD bond angle1.325
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.2802.270
High resolution limit [Å]2.2002.200
Rpim0.0590.341
Number of reflections11272955
<I/σ(I)>11.52.8
Completeness [%]99.6
Redundancy6.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M lithium acetate, 12-18% w/v PEG3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon