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7UF1

RibB from Vibrio cholera bound with D-Ribose-5-phosphate (D-R5P) and manganese

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-08
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameC 2 2 21
Unit cell lengths60.251, 78.583, 89.933
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.290 - 1.950
R-factor0.1814
Rwork0.176
R-free0.23450
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4p8e
RMSD bond length0.011
RMSD bond angle1.238
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.2902.000
High resolution limit [Å]1.9501.950
Rpim0.0490.500
Number of reflections157601092
<I/σ(I)>12.42
Completeness [%]98.8
Redundancy6.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M lithium acetate, 12-18% w/v PEG3350

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