7U6K
Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2021-06-30 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 75.261, 132.066, 134.986 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.620 - 2.380 |
R-factor | 0.1867 |
Rwork | 0.182 |
R-free | 0.22390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rva |
RMSD bond length | 0.011 |
RMSD bond angle | 1.205 |
Data reduction software | XDS (Jan 31, 2020) |
Data scaling software | XSCALE (Jan 31, 2020) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.620 | 2.470 |
High resolution limit [Å] | 2.380 | 2.380 |
Rmerge | 0.047 | 1.156 |
Rmeas | 0.051 | 1.243 |
Rpim | 0.019 | 0.455 |
Number of reflections | 27319 | 2835 |
<I/σ(I)> | 26.8 | 1.8 |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.4 | 7.4 |
CC(1/2) | 1.000 | 0.716 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | 400 mM MgCl2, 24% PEG 400, and 80 mM Tris HCl |