7U2V
Plasmodium falciparum Cyt c2 DSD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.73816 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 40.846, 54.613, 71.464 |
Unit cell angles | 90.00, 102.19, 90.00 |
Refinement procedure
Resolution | 39.920 - 2.550 |
R-factor | 0.1948 |
Rwork | 0.189 |
R-free | 0.24310 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | SOLVE |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.920 | 39.920 | 2.660 |
High resolution limit [Å] | 2.550 | 8.830 | 2.550 |
Rmerge | 0.410 | 0.095 | 3.162 |
Rmeas | 0.416 | 0.096 | 3.223 |
Rpim | 0.064 | 0.013 | 0.609 |
Total number of observations | 407151 | 12521 | 12083 |
Number of reflections | 8552 | 257 | 415 |
<I/σ(I)> | 20.2 | 28.5 | 8 |
Completeness [%] | 84.2 | 97 | 35.1 |
Redundancy | 47.6 | 48.7 | 29.1 |
CC(1/2) | 0.979 | 0.998 | 0.892 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 286 | 0.2 M sodium chloride, 0.1 M Bis-Tris, pH 5.5, 25% PEG3350 |