7TLF
Structure of the photoacclimated Light Harvesting Complex PE545 from Proteomonas sulcata
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979493 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 88.249, 132.237, 93.413 |
Unit cell angles | 90.00, 116.92, 90.00 |
Refinement procedure
Resolution | 29.350 - 2.800 |
R-factor | 0.2483 |
Rwork | 0.245 |
R-free | 0.30580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7tja |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.350 | 29.350 | 2.880 |
High resolution limit [Å] | 2.780 | 10.760 | 2.780 |
Rmerge | 0.240 | 0.079 | 0.904 |
Rmeas | 0.267 | 0.089 | 1.012 |
Rpim | 0.115 | 0.040 | 0.444 |
Total number of observations | 239812 | 3727 | 17890 |
Number of reflections | 46887 | 811 | 3661 |
<I/σ(I)> | 5 | 10.5 | 1.6 |
Completeness [%] | 97.2 | 94.5 | 77.2 |
Redundancy | 5.1 | 4.6 | 4.9 |
CC(1/2) | 0.989 | 0.994 | 0.739 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 25% PEG 3350, 50 mM HEPES, 100 mM MgCl2, and 15% glycerol. |