7TIV
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB48
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-08 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 96.394, 81.460, 54.639 |
Unit cell angles | 90.00, 116.50, 90.00 |
Refinement procedure
Resolution | 48.900 - 2.080 |
R-factor | 0.1798 |
Rwork | 0.176 |
R-free | 0.21570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jsu |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.230 | 1.920 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.256 | 2.347 |
Number of reflections | 30383 | 1617 |
<I/σ(I)> | 9 | 0.7 |
Completeness [%] | 98.5 | |
Redundancy | 6.9 | |
CC(1/2) | 0.994 | 0.432 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5 | 277 | 0.1 M potassium thiocyanate, 0.1 M sodium acetate, pH 5, and 20% (w/v) PEG 8000 |