Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7THH

SUD-C and Ubl2 domains of SARS CoV-2 Nsp3 protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-12
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.9792
Spacegroup nameP 1 21 1
Unit cell lengths30.173, 113.693, 109.688
Unit cell angles90.00, 93.02, 90.00
Refinement procedure
Resolution49.390 - 1.320
R-factor0.147
Rwork0.145
R-free0.19090
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6wrh
RMSD bond length0.009
RMSD bond angle1.450
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]49.39049.3901.350
High resolution limit [Å]1.3203.6101.320
Rmerge0.1360.1001.390
Rmeas0.1410.1041.522
Rpim0.0350.0250.597
Number of reflections16986287107797
<I/σ(I)>6.31.13
Completeness [%]99.310092.1
Redundancy12.917.35.3
CC(1/2)0.9850.9960.513
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.62890.2 M ammonium iodide, 20% PEG 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon