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7TCM

Crystal Structure of aspartate-semialdehyde dehydrogenase from Acinetobacter baumannii in complex with NADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2021-11-21
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 1 21 1
Unit cell lengths82.950, 53.210, 87.330
Unit cell angles90.00, 102.36, 90.00
Refinement procedure
Resolution45.150 - 1.950
R-factor0.1528
Rwork0.152
R-free0.18420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)apo structure pdb entry 7SKB
RMSD bond length0.007
RMSD bond angle0.822
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20-4438)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.000
High resolution limit [Å]1.9508.7201.950
Rmerge0.0430.0300.191
Rmeas0.0500.0360.249
Number of reflections532926563245
<I/σ(I)>18.4235.394.3
Completeness [%]97.497.580.9
Redundancy3.4983.3082.34
CC(1/2)0.9980.9980.945
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5287Molecular Dimensions/Calibre MCSG1 screen, condition B3: 200mM Ammonium acetate,100mM BisTris / HCl pH 5.5, 25% (w/V) PEG 3350: AcbaC.17885.a.B1.PW38925 at 18mg/ml + 3mM NADP: additionally soaked over night with 5mM NADP: tray 3420159 b5: 15% EG + soak: puck: xdl8-1.

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PDB entries from 2024-12-25

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