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7T9W

Crystal structure of the Nsp3 bSM (Betacoronavirus-Specific Marker) domain from SARS-CoV-2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2021-12-09
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 43
Unit cell lengths157.462, 157.462, 79.619
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.420 - 2.200
R-factor0.2627
Rwork0.262
R-free0.31620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold2 model
RMSD bond length0.003
RMSD bond angle0.535
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.240
High resolution limit [Å]2.2002.200
Rmerge0.1040.893
Rpim0.0400.389
Number of reflections987084940
<I/σ(I)>17.41.23
Completeness [%]100.099.9
Redundancy7.56.1
CC(1/2)0.9920.658
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP629840% tacsimate, 0.5 M MES pH 6

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