7T24
Crystal Structure of Adenylosuccinate lyase (ASL) from Pseudomonas aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-17 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.1271 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 66.560, 96.550, 137.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.280 - 1.450 |
R-factor | 0.1519 |
Rwork | 0.151 |
R-free | 0.18200 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20rc3-4406) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.280 | 33.280 | 1.490 |
High resolution limit [Å] | 1.450 | 6.480 | 1.450 |
Rmerge | 0.090 | 0.066 | 0.537 |
Rmeas | 0.098 | 0.072 | 0.648 |
Total number of observations | 483651 | ||
Number of reflections | 77812 | 972 | 5155 |
<I/σ(I)> | 11.55 | 23.97 | 2.2 |
Completeness [%] | 98.9 | 98.8 | 89.7 |
Redundancy | 6.216 | 6.515 | 3.129 |
CC(1/2) | 0.996 | 0.994 | 0.766 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 287 | PsaeA.17999.a.B1.PW38913 at 19 mg/ml, Native data: mixed 1:1 with Morpheus(d4): 12.5% w/v PEG 1000, 12.5% w/v PEG 3350, 12.5% v/v MPD, 0.1 M MES/imidazole pH 6.5, 0.02 M each of 1,6-hexanediol, 1-butanol, (RS)-1,2-propanediol, 2-propanol, 1,4-butanediol, 0.2 M 1,3-propanediol. Puck: qog3-8, barcode: 319675d4. Anomalous data: mixed 1:1 with Morpheus(H12): 12.5% (w/v) PEG-1000, 12.5% (w/v) PEG-3350, 12.5% (v/v) MPD, 0.1 M bicine/Trizma base, pH=8.5, 0.02 M each sodium L-glutamate, DL-alanine, glycine, DL-lysine HCl, DL-serine. Preformed crystal then soaked 20 sec with 500 mM sodium iodide and 10% ethylene glycol. Puck: kdy1-11, barcode: 319672h12. |