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7SKN

De novo synthetic protein DIG8-CC (tetragonal space group)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-30
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.96770
Spacegroup nameP 41 21 2
Unit cell lengths58.170, 58.170, 173.500
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.170 - 2.300
R-factor0.264
Rwork0.263
R-free0.30120
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)De novo designed protein
RMSD bond length0.002
RMSD bond angle0.482
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.1_4122)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.2002.430
High resolution limit [Å]2.3002.300
Rmerge0.1782.829
Rpim0.0330.520
Number of reflections139942074
<I/σ(I)>15.21.5
Completeness [%]1.00.997
Redundancy29.3
CC(1/2)0.9990.865
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293To be updated

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PDB entries from 2024-05-15

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