7SEV
Crystal structure of E coli contaminant protein YadF co-purified with a plant protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.891 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 67.500, 67.500, 85.212 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.030 - 2.300 |
R-factor | 0.2059 |
Rwork | 0.204 |
R-free | 0.24270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold AF-P61517-F1 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.030 | 2.360 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 16710 | 665 |
<I/σ(I)> | 9.9 | |
Completeness [%] | 100.0 | |
Redundancy | 24 | |
CC(1/2) | 0.995 | 0.812 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M sodium cacodylate, pH 6.8 and 1.8 M (NH4)2SO4 |