Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7SDN

[C:Ag+:U] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-12-12
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.00743
Spacegroup nameH 3
Unit cell lengths107.272, 107.272, 92.998
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.860 - 4.320
R-factor0.1705
Rwork0.169
R-free0.19080
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle0.890
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwareAutoSol
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]65.72565.7254.876
High resolution limit [Å]4.32010.1984.322
Number of reflections1853205206
<I/σ(I)>5.413.60.5
Completeness [%]84.9100
Redundancy10.410.910.7
CC(1/2)0.9950.9940.563
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.8293MOPS, Magnesium sulfate, Silver nitrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon