Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7SDI

[T:Hg2+:U] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-14
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.00743
Spacegroup nameH 3
Unit cell lengths105.972, 105.972, 93.052
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.670 - 3.580
R-factor0.2345
Rwork0.233
R-free0.25520
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle0.971
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwareAutoSol
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]65.34165.3414.014
High resolution limit [Å]3.57810.3473.578
Number of reflections2913192196
<I/σ(I)>9.2
Completeness [%]84.0
Redundancy10.7
CC(1/2)0.9970.9970.344
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.8293MOPS, Magnesium sulfate, Mercury chloride

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon