7SBH
Crystal structure of the iron superoxide dismutase from Acinetobacter sp. Ver3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-11 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 70.933, 87.016, 75.606 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.490 - 1.340 |
R-factor | 0.1452 |
Rwork | 0.144 |
R-free | 0.16240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1isa |
RMSD bond length | 0.012 |
RMSD bond angle | 1.147 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.540 | 1.370 |
High resolution limit [Å] | 1.340 | 1.340 |
Rmerge | 0.062 | 0.749 |
Rmeas | 0.067 | 0.833 |
Rpim | 0.026 | 0.360 |
Number of reflections | 51999 | 2402 |
<I/σ(I)> | 18.9 | 2.4 |
Completeness [%] | 99.7 | |
Redundancy | 6.6 | |
CC(1/2) | 0.999 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 22 % w/v PEG 8000, 100 mM sodium cacodylate pH 7.5, 200 mM magnesium acetate, 1 mM flavin mononucleotide |