7S79
STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH SYNTHETIC PHOSPHONO-MLL PEPTIDE ANALOG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97953 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 65.860, 65.860, 238.857 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.250 - 1.530 |
R-factor | 0.1707 |
Rwork | 0.170 |
R-free | 0.19590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rzd |
RMSD bond length | 0.010 |
RMSD bond angle | 1.571 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.450 | 1.570 |
High resolution limit [Å] | 1.530 | 1.530 |
Rmerge | 0.049 | 0.717 |
Number of reflections | 80429 | 5721 |
<I/σ(I)> | 22.4 | 2.7 |
Completeness [%] | 99.8 | 97.7 |
Redundancy | 8.7 | 8.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 290 | 18-24% PEG4000, 0.1 SODIUM CITRATE, 20% ISOPROPANOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE |