7S6E
Crystal structure of UrtA from Synechococcus CC9311 in complex with urea and calcium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I23 |
Synchrotron site | Diamond |
Beamline | I23 |
Temperature [K] | 50 |
Detector technology | PIXEL |
Collection date | 2020-06-26 |
Detector | DECTRIS PILATUS 12M |
Wavelength(s) | 3.0240, 3.3509, 4.2753, 4.7686 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.760, 117.120, 123.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 85.114 - 1.973 |
Rwork | 0.147 |
R-free | 0.17370 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.640 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | CRANK2 |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 85.114 | 84.970 | 2.020 |
High resolution limit [Å] | 1.970 | 9.040 | 1.970 |
Rmerge | 0.076 | 0.042 | 0.295 |
Rmeas | 0.080 | 0.043 | 0.343 |
Rpim | 0.026 | 0.012 | 0.172 |
Number of reflections | 49942 | 630 | 2550 |
<I/σ(I)> | 22.8 | ||
Completeness [%] | 93.3 | ||
Redundancy | 15.6 | 22 | 6.7 |
CC(1/2) | 0.999 | 0.999 | 0.945 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.062 M MES; 0.038 imidazole, pH 6.5, 0.03M MgCl2, 0.03M CaCl2.2H2O, 12.5% w/v PEG 1000, 12.5% w/v PEG 3350, 12.5% v/v MPD |