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7S5F

Crystal structure of mannose-6-phosphate reductase from celery (Apium graveolens) leaves with NADP+ and mannonic acid bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2019-06-15
DetectorADSC QUANTUM 315r
Wavelength(s)1.008
Spacegroup nameC 1 2 1
Unit cell lengths152.202, 61.779, 148.063
Unit cell angles90.00, 107.67, 90.00
Refinement procedure
Resolution38.070 - 1.720
R-factor0.1823
Rwork0.181
R-free0.21060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2iki
RMSD bond length0.005
RMSD bond angle0.960
Data reduction softwareHKL-2000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.760
High resolution limit [Å]1.7201.720
Rmerge0.081
Number of reflections1320866719
<I/σ(I)>152.2
Completeness [%]95.8
Redundancy6
CC(1/2)0.9970.710
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.62970.2 M ammonium formate, 20% (w/v) PEG 3500

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PDB entries from 2024-05-15

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