7RXS
Crystal of BRD4(D1) with 2-[(3S)-3-{5-[2-(3,5-dimethylphenoxy)pyrimidin-4-yl]-4-(4-iodophenyl)-1H-imidazol-1-yl}pyrrolidin-1-yl]ethan-1-amine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 30.193, 41.446, 110.199 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.790 - 1.430 |
R-factor | 0.1922 |
Rwork | 0.190 |
R-free | 0.22820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jt4 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.450 | 41.450 | 1.460 |
High resolution limit [Å] | 1.430 | 7.840 | 1.430 |
Rmerge | 0.053 | 0.030 | 0.650 |
Rmeas | 0.061 | 0.034 | 0.736 |
Rpim | 0.028 | 0.014 | 0.336 |
Total number of observations | 123698 | 812 | 4786 |
Number of reflections | 25500 | 178 | 1128 |
<I/σ(I)> | 16.1 | 55.1 | 2 |
Completeness [%] | 97.1 | 91.7 | 91.3 |
Redundancy | 4.9 | 4.6 | 4.2 |
CC(1/2) | 0.998 | 0.999 | 0.901 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | PEG 3350 |