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7RVY

Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI25

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]120
Detector technologyPIXEL
Collection date2021-04-12
DetectorBruker PHOTON II
Wavelength(s)1.54224
Spacegroup nameI 1 2 1
Unit cell lengths54.478, 81.239, 86.587
Unit cell angles90.00, 97.02, 90.00
Refinement procedure
Resolution24.210 - 1.850
R-factor0.2327
Rwork0.231
R-free0.26800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7jpy
RMSD bond length0.009
RMSD bond angle1.190
Data reduction softwarePROTEUM PLUS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.2101.890
High resolution limit [Å]1.8501.850
Number of reflections296581614
<I/σ(I)>12.2
Completeness [%]92.6
Redundancy4.2
CC(1/2)0.9960.972
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2890.2 M Ammonium phosphate dibasic, 17% w/v PEG3350, pH8.0

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PDB entries from 2024-05-15

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