7RVV
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI22
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2021-04-14 |
Detector | Bruker PHOTON II |
Wavelength(s) | 1.54189 |
Spacegroup name | P 1 |
Unit cell lengths | 46.460, 52.264, 64.118 |
Unit cell angles | 108.82, 97.36, 98.14 |
Refinement procedure
Resolution | 48.520 - 3.000 |
R-factor | 0.346 |
Rwork | 0.341 |
R-free | 0.42790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jpy |
RMSD bond length | 0.010 |
RMSD bond angle | 1.383 |
Data reduction software | PROTEUM PLUS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.520 | 3.180 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 10377 | 1721 |
<I/σ(I)> | 6.1 | |
Completeness [%] | 93.2 | |
Redundancy | 2.8 | |
CC(1/2) | 0.976 | 0.941 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 0.2 M Ammonium phosphate dibasic, 17% w/v PEG3350, pH8.0 |