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7RVI

Segment from naked mole rat (elk T174S) prion protein 168-176 QYNNQNSFV

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeELECTRON MICROSCOPE
Source detailsOTHER
Temperature [K]100
Detector technologyCMOS
Collection date2018-06-28
DetectorTVIPS TEMCAM-F416
Wavelength(s)0.0251
Spacegroup nameC 1 2 1
Unit cell lengths62.760, 4.850, 21.520
Unit cell angles90.00, 109.14, 90.00
Refinement procedure
Resolution10.760 - 1.050
R-factor0.2271
Rwork0.222
R-free0.26480
Structure solution methodAB INITIO PHASING
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXD
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]10.76010.7601.080
High resolution limit [Å]1.0504.7001.050
Rmerge0.2870.1520.589
Rmeas0.3050.1610.623
Total number of observations21917
Number of reflections261218187
<I/σ(I)>57.992.47
Completeness [%]79.937.583.5
Redundancy8.3916.2228.561
CC(1/2)0.9810.9910.913
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52980.1 M sodium cacodylate, pH 6.5, 5% isopropanol, 0.1 M zinc acetate

219869

PDB entries from 2024-05-15

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