7RV7
Crystal structure of the BCL6 BTB domain in complex with OICR-9322
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-06-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 30.556, 74.943, 53.083 |
Unit cell angles | 90.00, 104.92, 90.00 |
Refinement procedure
Resolution | 30.260 - 1.630 |
R-factor | 0.1651 |
Rwork | 0.164 |
R-free | 0.19580 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.29) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.470 | 37.470 | 1.820 |
High resolution limit [Å] | 1.630 | 3.640 | 1.630 |
Rmerge | 0.046 | 0.025 | 0.347 |
Rmeas | 0.055 | 0.029 | 0.413 |
Rpim | 0.030 | 0.016 | 0.222 |
Total number of observations | 46448 | 4222 | 13459 |
Number of reflections | 14298 | 1308 | 4038 |
<I/σ(I)> | 14.4 | 39.6 | 3.3 |
Completeness [%] | 98.8 | 98.5 | 98.8 |
Redundancy | 3.2 | 3.2 | 3.3 |
CC(1/2) | 0.999 | 0.998 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 292 | Precipitant solution was 16-20% PEG 8K in 0.1M pH 6. BisTris buffer. Crystals were soaked in 0.1M Hepes 7.4, 20% PEG 8K, 25% glycerol 0.5 mM ligand prior to passage through paratone and freezing. |